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Supporting efficient nutrient transport

Supporting efficient nutrient transport

Plants are known trasnport show different responses to different specific Nutriemt deficiencies and the responses can erficient between species. Mitigation NRCS helps Liver health and balanced nutrition producers and private landowners voluntarily mitigate climate change reduce greenhouse gas emissions and improve carbon storage by providing technical and financial assistance, tools, science, and knowledge. USDA photo by Bob Nichols. A recent study showed that the shift in the affinity mode of NRT1.

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Nutrient Transport

Supporting efficient nutrient transport -

gov website. Share sensitive information only on official, secure websites. Historic funding from Inflation Reduction Act an unprecedented investment in American agriculture.

From climate-smart agriculture, to supporting healthy forests and conservation, to tax credits, to biofuels, infrastructure and beyond, the Inflation Reduction Act provides USDA with significant additional resources to continue to lead the charge.

producers and consumers by adding program flexibilities, expanding options and assistance, and investing in nutrient management strategies to help farmers address local resource concerns and global food security while also improving their bottom line.

Alongside the Bipartisan Infrastructure Act and American Rescue Plan, the Inflation Reduction Act provides once-in-a-generation investment in rural communities and their infrastructure needs, while also responding to the climate crisis.

This includes:. For more information and resources for nutrient management planning, visit farmers. USDA touches the lives of all Americans each day in so many positive ways. To learn more, visit usda. Home … Sustainability Environmental sustainability Encouraging low-input farming Nutrients Sustainable use of nutrients.

Page contents. Nutrients in EU agriculture Nutrients such as nitrogen, potassium and phosphorous are essential for crop production. CAP actions The CAP promotes sustainable agricultural systems in the EU, enabling farmers to: provide safe, healthy, and sustainably produced food for society; earn a stable and fair income, taking into account the full range of public goods they provide; protect natural resources, enhance biodiversity, and contribute to the fight against climate change.

Cross-compliance Under cross-compliance rules, all beneficiaries of the CAP have their payments linked with a set of statutory management requirements SMRs and good agricultural and environmental conditions GAECs.

Cross-compliance rules relating to nutrients include: the linking of payments with the nitrates directive SMR 1 ; GAECs designed to protect water and soil , which involve the responsible use of nutrients. Rural development The sustainable use of nutrients can be supported through rural development , the so-called 'second pillar' of the CAP.

Measures to support knowledge transfer and information, advisory services, and cooperation can be used to develop and disseminate knowledge on safe and efficient nutrient application; Measures to support organic farming encourage reductions in the use of inorganic fertilisers.

CAP The CAP entered into force on 1 January CAP specific objectives Sustainable nutrient management is relevant for a number of specific objectives for the CAP , particularly those relating to climate change, natural resources and biodiversity. CAP Strategic Plans In their CAP Strategic Plans , EU countries have the flexibility to tailor strategies and interventions that can improve nutrient management at national level, in line with EU targets.

New green architecture The CAP includes strengthened rules and enhanced opportunities to support the efficient use of nutrients. Knowledge, research, and innovation The Commission supports research and innovation in agriculture and forestry, with areas of focus including sustainable primary production and water, nutrients and waste.

Related links CAP at a glance. The simulation was performed with SimRoot , a mathematical model of root systems based on empirical growth parameters of common beans Lynch et al. More recently, a field-scale mathematical model of wheat based on the root system model described by Roose et al.

We believe that such modeling studies when combined with empirical data will enhance understanding of the regulatory network responses to spatial and temporal changes in nutrient availability. Further evaluations of physiological consequences will require determinations of thedynamics and distribution patterns of mineral nutrients in soil.

Molecular genetic studies of A. thaliana have identified and characterized several genes involved in nutrient-dependent root architecture changes, particularly the root architecture responses to nitrate deficiency. The nitrate transporter NRT1.

In an NRT1. Krouk et al. The transcription factors responsible for the response of root morphology to nitrate have been identified, of which ANR1 was the first. ANR1 encodes a MADS-box transcription factor that positively regulates LR elongation under high-nitrate conditions, via the same pathway as NRT1.

A loss of ANR1 function alters the root response to low nitrate Zhang and Forde , and its overexpression confirmed the positive effect of ANR1 on LR elongation, but not on PR development Gan et al. The architectural changes of roots under low-nitrate conditions are also induced by the high-affinity nitrate transporter NRT2.

The basic leucine zipper bZIP transcription factors TGA1 and TGA4 regulate the expression of NRT2. This suggests that TGA1 and TGA4 regulate the nitrate-responsive root architecture partly via the same pathway as NRT2.

These studies revealed the complex nature of the regulatory network that involves transcription factors, transporters and root architecture.

Plant hormones are involved in root development and architecture determination. The significance of phytohormones, particularly auxin, in the nutrient-dependent regulation of the root system is now clear.

Auxin transport by NRT1. The distribution of auxin, which is controlled by both its transport and biosynthesis, is probably a major signal that modulates root development in a nutrient-dependent manner. LR elongation in response to localized iron is induced by the AUX1-mediated redistribution of auxin Giehl et al.

Auxin can also control PR elongation, and PR growth is inhibited by the redistribution of auxin by PIN1 in the presence of excess copper H. Yuan et al. Ma et al. Phytohormones affect root architecture, and emerging molecular evidence suggests that nutrients and hormones interact in a complex manner.

A broader picture of the regulatory network will be revealed by further work on this issue together with studies of transcription factors and transporters. To acquire and distribute essential nutrients efficiently under nutrient starvation, nutrient transport must be co-ordinated by transport molecules in plant organs.

Recent studies have revealed the involvement of novel players belonging to previously categorized families in the transport of specific elements at different steps, such as uptake into root cells and subsequent xylem loading in roots.

For example, A. thaliana NRT2. Arabidopsis thaliana requires MGT6, an Mg transporter localized to the plasma membrane, for Mg uptake into roots and normal growth under low-Mg conditions Mao et al.

Further, an additional unknown K uptake pathway was implied, other than HAK5 and AKT1, major transport molecules for K acquisition in A. thaliana Caballero et al. For micronutrients, OsNramp5 is essential for efficient Mn uptake into roots and normal growth under Mn-limited conditions in rice Ishimaru et al.

OsHMA5, a heavy metal P-type ATPase, has a fundamental role in the root to shoot translocation of Cu; it is expressed in the root pericycle and xylem of the vascular bundles Deng et al.

One remarkable recent discovery was the identification of transporters that modulate the nutrient distribution in the aerial portion of plants. OsHMA2 was first shown to function in the root to shoot translocation of Zn in rice Satoh-Nagasawa et al.

OsNramp3, which is expressed in the nodes, calibrates Mn transport to young growing leaves in rice Yamaji et al. OsYSL16, a Cu—nicotianamine transporter expressed in the phloem of nodes, is responsible for distributing Cu from mature to growing leaves and from the flag leaf to panicles, ensuring fertility Zheng et al.

thaliana Garcia-Molina et al. In addition, in the reproductive organs, it was reported that the B exporter OsBOR4 is expressed predominantly in pollen and is required for pollen germination and pollen tube elongation Tanaka et al.

These studies show that plants allocate specific transporters to particular cells and processes with distinct transport substrates, affinities and subcellular localizations. These transporters with diverse functions appear to have evolved via neofunctionalization and subfunctionalization, to maximize not only the initial uptake in roots but also source to sink translocation and cellular compartmentalization during both vegetative and reproductive stages.

Transporters for essential nutrients have been identified and characterized in the model plants A. thaliana and O. With the increased genomic information on non-vascular plants and crops now available, the physiological functions of transporter homologs have begun to be verified experimentally.

In Physcomitrella patens , a model moss, the disruption of PpHAK2 , a HAK transporter gene homolog, impairs growth under K starvation Haro et al.

PpHAK13 , another HAK transporter gene, encodes a high-affinity Na transporter that functions under K limitation Benito et al. For commercially important plants, the high-affinity ammonium importers ZmAMT1;1a and ZmAMT1;3 have been characterized in Zea mays Gu et al. Homologs of BOR1 , a B exporter required under B limitation, have been identified in Triticum aestivum Leaungthitikanchana et al.

These studies are examples of the clarification of conserved or diverged functions of transporters in a wide range of plant species.

It is of particular interest to discuss the diversification of transporters along with changes in nutrient requirements and vascular systems from an evolutionary perspective.

Regulation of transporter expression such that each transporter performs its function at the appropriate time and location to maintain overall homeostasis is crucial. The transcriptional control of transporter genes has been investigated extensively as an initial step in gene expression.

Several transcriptional factors regulating the same transporter have been identified using different approaches. The expression of HAK5 , the gene encoding a high-affinity K transporter, is increased upon K starvation in A.

thaliana Ahn et al. Using the activation tagging method, the transcription factor RAP2. Four other candidate transcription factors have been identified using the TF FOX library Hong et al. Among investigations of nitrate signaling, two reports have demonstrated that the transcription factor NIN-LIKE PROTEINs NLPs controls nitrate-inducible transcription of genes, including nitrate transporter NRT genes Konishi and Yanagisawa , Marchive et al.

Suppression of NLP6 function reduces mRNA induction of NRT1. FIT AtbHLH29 forms heterodimers with AtbHLH38, AtbHLH39, AtbHLH and AtbHLH, and mediates the Fe starvation-induced transcription of IRT1 Colangelo and Guerinot , Yuan et al.

As in the root architecture response, transcription factors play important roles in regulation, although those controlling root architecture and transporter expression are not always shared, suggesting that multiple systems regulate the sensing of nutrients and the responses thereto.

The control of mRNA stability is also vital for maintaining mRNA levels and controlling the rate of change in mRNA accumulation. Several studies have shown examples of the control of mRNA stability in response to environmental stimuli in plants Bhat et al.

In an exploration of nutrient-dependent mRNA stability, Tanaka et al. thaliana NIP5;1 , a gene encoding the NIP5;1 boric acid channel, was destabilized in the presence of sufficient boric acid. NIP5;1, a member of the major intrinsic family, is required for B uptake under B limitation, and NIP5;1 mRNA is elevated fold when transferred to B-deficient conditions Takano et al.

Tanaka et al. This study provides clear evidence that nutrient availability controls mRNA turnover, and this control is critical for normal growth. A study by Yuan et al. In Nicotiana tabacum , transcript levels of AtAMT1;1 driven by the Cauliflower mosaic virus 35S promoter are reduced when ammonium is supplied.

The regulation of mRNA turnover is more efficient than transcriptional down-regulation in terms of reducing transcript levels rapidly. Depending on the transporters and properties of the nutrient, mRNA turnover regulation might facilitate adaptation to changes in nutrient conditions.

Few reports on translational regulation in response to nutrient availability in plants have been published. The translation of the transporter ZIF2 Zinc-induced Facilitator 2 is enhanced under high Zn conditions in A.

thaliana by producing a splice variant that increases translation under high Zn conditions Remy et al. ZIF2 is localized to the tonoplast and promotes Zn tolerance via Zn compartmentalization.

At least nine splice variants are produced from the ZIF2 gene, all of which encode the same full size ZIF2 transporter. Two splice variants are produced predominantly in roots: ZIF2. Moreover, the prediction of RNA secondary structures indicated that the ZIF2. A mutation that destabilized the predicted stem—loop markedly weakened the translation induced by a high Zn concentration.

The increased ZIF2. Based on the differences in splicing variant abundances among organs and conditions, this study suggests that control of translation, which is associated with alternative splicing, enables synthesis of the appropriate quantity of transporters to meet the variable demand.

The polar localization of transporters is thought to be important for the directional transport of substrates. Increasing numbers of mineral transporters in plants are reported to have polar localization. These include Lsi and Lsi2 transporters of silicon, which is a beneficial element Ma et al.

However, few reports on the underlying molecular mechanisms and physiological impact of polar localization exist. The Fe transporter IRT1 is localized to the plasma membrane facing the rhizosphere in the root epidermis under metal depletion Barberon et al.

IRT1 is a key player in Fe acquisition, but also transports other metals, such as Zn, Mn and Co Vert et al. FYVE1, a phosphatidylinositolphosphate PI3P -binding protein, was found to be responsible for the recycling and polar localization of IRT1, thereby controlling metal homeostasis Barberon et al.

Characterization of a mutant with defective localization of green fluorescent protein GFP —NIP5;1 showed that d -galactose synthesis by UDP-glucose 4-epimerase 4 UGE4 is required for general endomembrane organization Uehara et al.

The polar localization of BOR1 requires three tyrosine residues Tyr, Tyr and Tyr in a putative cytoplasmic loop; these are potential tyrosine-based motifs for membrane trafficking, while Tyr, which is also located in the loop, is not involved Takano et al.

The three tyrosine residues are also required for the degradation of BOR1 under high-B conditions, as described below Takano et al. These results suggest that membrane trafficking is the molecular basis for establishment of polarity, including recycling between the plasma membrane and endosomes.

Further identification of the molecules and amino acid residues in transporters that are essential for polar localization will clarify the effect of polarity on the directional flow of substrates and subsequent nutrient accumulation. Most essential elements are toxic at high concentrations.

Control of protein degradation is critical for the regulation of transporter levels and the down-regulation of transporters required to avoid overloading when nutrient concentrations are elevated.

Recent studies have demonstrated that the ubiquitination of transporters triggers their selective degradation. The E2 ubiquitin-conjugating enzyme and E3 ubiquitin ligase involved in this process have been identified.

Furthermore, expression of PHO2 , which encodes the E2 conjugase UBC24, is required for the ubiquitination and degradation of the phosphate transporter Pht1;4 also a member of the PHT1 family under inorganic phosphorus Pi -sufficient conditions Park et al.

Under Pi starvation, the transcript levels of NLA and PHO2 are down-regulated by low-P-inducible miR and miR, respectively Hsieh et al. High-B-inducible degradation of BOR1, a B transporter, is mediated by the ubiquitination of a lysine residue Takano et al.

As indicated above, the tyrosine residues important for polar localization are also required for degradation Takano et al. Mono-ubiquitination of the Lys or Lys residue in the intracellular loop of the Fe transporter IRT1 is responsible for the turnover of IRT1 protein in a mechanism that regulates plant Fe accumulation Kerkeb et al.

Thus, membrane trafficking is also an important process for selective protein degradation. Because enhanced protein stability may reduce the effects on protein quantity of down-regulation of transcript levels or translation, control of protein turnover is important for regulation of protein levels.

Importantly, a single transporter can be regulated at multiple steps. Identification of mechanisms that co-ordinate multistep regulation is clearly crucial for improved understanding of transporter quantity optimization. Transporter activity is controlled by protein quantity and is regulated in part by post-translational modifications that can directly affect transport properties.

The A. thaliana nitrate transporter NRT1. The phosphorylation of Thr converts the affinity from low to high Liu and Tsay The replacement of Thr with alanine and aspartic acid to prevent and mimic phosphorylation, respectively converts NRT1.

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